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Paola Bonizzoni: [Publications] [Author Rank by year] [Co-authors] [Prefers] [Cites] [Cited by]

Publications of Author

  1. Paola Bonizzoni, Gianluca Della Vedova, Riccardo Dondi
    Reconciling Gene Trees to a Species Tree. [Citation Graph (0, 0)][DBLP]
    CIAC, 2003, pp:120-131 [Conf]
  2. Paola Bonizzoni, Clelia de Felice, Giancarlo Mauri
    Recombinant DNA , Gene Splicing as Generative Devices of Formal Languages. [Citation Graph (0, 0)][DBLP]
    CiE, 2005, pp:65-67 [Conf]
  3. Paola Bonizzoni, Gianluca Della Vedova, Riccardo Dondi, Giancarlo Mauri
    Fingerprint Clustering with Bounded Number of Missing Values. [Citation Graph (0, 0)][DBLP]
    CPM, 2006, pp:106-116 [Conf]
  4. Paola Bonizzoni, Gianluca Della Vedova, Giancarlo Mauri
    Approximating the Maximum Isomorphic Agreement Subtree Is Hard. [Citation Graph (0, 0)][DBLP]
    CPM, 2000, pp:119-128 [Conf]
  5. Paola Bonizzoni, Clelia de Felice, Giancarlo Mauri, Rosalba Zizza
    Decision Problems for Linear and Circular Splicing Systems. [Citation Graph (0, 0)][DBLP]
    Developments in Language Theory, 2002, pp:78-92 [Conf]
  6. Paola Bonizzoni, Clelia de Felice, Giancarlo Mauri, Rosalba Zizza
    Regular Languages Generated by Reflexive Finite Splicing Systems. [Citation Graph (0, 0)][DBLP]
    Developments in Language Theory, 2003, pp:134-145 [Conf]
  7. Paola Bonizzoni, Giancarlo Mauri
    A Decision Procedure for Reflexive Regular Splicing Languages. [Citation Graph (0, 0)][DBLP]
    Developments in Language Theory, 2006, pp:315-326 [Conf]
  8. Paola Bonizzoni, Clelia de Felice, Giancarlo Mauri, Rosalba Zizza
    DNA and Circular Splicing. [Citation Graph (0, 0)][DBLP]
    DNA Computing, 2000, pp:117-129 [Conf]
  9. Paola Bonizzoni
    A Tight Lower Bound for Primitivity in k-Structures. [Citation Graph (0, 0)][DBLP]
    ICALP, 1994, pp:556-567 [Conf]
  10. Paola Bonizzoni, Gianluca Della Vedova, Riccardo Dondi, Guillaume Fertin, Stéphane Vialette
    Exemplar Longest Common Subsequence. [Citation Graph (0, 0)][DBLP]
    International Conference on Computational Science (2), 2006, pp:622-629 [Conf]
  11. Paola Bonizzoni, Gianluca Della Vedova, Riccardo Dondi, Lorenzo Mariani
    Experimental Analysis of a New Algorithm for Partial Haplotype Completion. [Citation Graph (0, 0)][DBLP]
    International Conference on Computational Science (2), 2005, pp:952-959 [Conf]
  12. Paola Bonizzoni, Gianluca Della Vedova, Riccardo Dondi, Tao Jiang
    Correlation Clustering and Consensus Clustering. [Citation Graph (0, 0)][DBLP]
    ISAAC, 2005, pp:226-235 [Conf]
  13. Paolo Barone, Paola Bonizzoni, Gianluca Della Vedova, Giancarlo Mauri
    An approximation algorithm for the shortest common supersequence problem: an experimental analysis. [Citation Graph (0, 0)][DBLP]
    SAC, 2001, pp:56-60 [Conf]
  14. Paola Bonizzoni, Graziano Pesole, Raffaella Rizzi
    A Method to Detect Gene Structure and Alternative Splice Sites by Agreeing ESTs to a Genomic Sequence. [Citation Graph (0, 0)][DBLP]
    WABI, 2003, pp:63-77 [Conf]
  15. Paola Bonizzoni, Gianluca Della Vedova
    Modular Decomposition of Hypergraphs. [Citation Graph (0, 0)][DBLP]
    WG, 1995, pp:303-317 [Conf]
  16. Paola Bonizzoni, Raffaella Rizzi, Graziano Pesole
    ASPIC: a novel method to predict the exon-intron structure of a gene that is optimally compatible to a set of transcript sequences. [Citation Graph (0, 0)][DBLP]
    BMC Bioinformatics, 2005, v:6, n:, pp:244- [Journal]
  17. Paola Bonizzoni, Clelia de Felice, Giancarlo Mauri, Rosalba Zizza
    On the power of circular splicing. [Citation Graph (0, 0)][DBLP]
    Discrete Applied Mathematics, 2005, v:150, n:1-3, pp:51-66 [Journal]
  18. Paola Bonizzoni, Clelia de Felice, Giancarlo Mauri, Rosalba Zizza
    Linear splicing and syntactic monoid. [Citation Graph (0, 0)][DBLP]
    Discrete Applied Mathematics, 2006, v:154, n:3, pp:452-470 [Journal]
  19. Paola Bonizzoni, Gianluca Della Vedova, Giancarlo Mauri
    Experimenting an approximation algorithm for the LCS. [Citation Graph (0, 0)][DBLP]
    Discrete Applied Mathematics, 2001, v:110, n:1, pp:13-24 [Journal]
  20. Paola Bonizzoni, Gianluca Della Vedova, Giancarlo Mauri
    Approximating the Maximum Isomorphic Agreement Subtree is Hard. [Citation Graph (0, 0)][DBLP]
    Int. J. Found. Comput. Sci., 2000, v:11, n:4, pp:579-590 [Journal]
  21. Paola Bonizzoni, Claudio Ferretti, Giancarlo Mauri, Rosalba Zizza
    Separating some splicing models. [Citation Graph (0, 0)][DBLP]
    Inf. Process. Lett., 2001, v:79, n:6, pp:255-259 [Journal]
  22. Paola Bonizzoni, Gianluca Della Vedova
    An Algorithm for the Modular Decomposition of Hypergraphs. [Citation Graph (0, 0)][DBLP]
    J. Algorithms, 1999, v:32, n:2, pp:65-86 [Journal]
  23. Paola Bonizzoni, Gianluca Della Vedova, Riccardo Dondi, Jing Li 0002
    The Haplotyping Problem: An Overview of Computational Models and Solutions. [Citation Graph (0, 0)][DBLP]
    J. Comput. Sci. Technol., 2003, v:18, n:6, pp:675-688 [Journal]
  24. Paola Bonizzoni, Gianluca Della Vedova, Tao Jiang
    Foreword - Special Issue on Bioinformatics. [Citation Graph (0, 0)][DBLP]
    J. Comput. Sci. Technol., 2004, v:19, n:1, pp:1- [Journal]
  25. Tiziana Castrignanò, Raffaella Rizzi, Ivano Giuseppe Talamo, Paolo D'Onorio De Meo, Anna Anselmo, Paola Bonizzoni, Graziano Pesole
    ASPIC: a web resource for alternative splicing prediction and transcript isoforms characterization. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2006, v:34, n:Web-Server-Issue, pp:440-443 [Journal]
  26. Paola Bonizzoni
    Primitive 2-structures with the (n-2)-Property. [Citation Graph (0, 0)][DBLP]
    Theor. Comput. Sci., 1994, v:132, n:2, pp:151-178 [Journal]
  27. Paola Bonizzoni, Clelia de Felice, Rosalba Zizza
    The structure of reflexive regular splicing languages via Sch6uuml;tzenberger constants. [Citation Graph (0, 0)][DBLP]
    Theor. Comput. Sci., 2005, v:334, n:1-3, pp:71-98 [Journal]
  28. Paola Bonizzoni, Ross M. McConnell
    Nesting of prime substructures in k-ary relations. [Citation Graph (0, 0)][DBLP]
    Theor. Comput. Sci., 2001, v:259, n:1-2, pp:341-357 [Journal]
  29. Paola Bonizzoni, Giancarlo Mauri
    Regular splicing languages and subclasses. [Citation Graph (0, 0)][DBLP]
    Theor. Comput. Sci., 2005, v:340, n:1, pp:349-363 [Journal]
  30. Paola Bonizzoni, Giancarlo Mauri
    On Automata on Infinite Trees. [Citation Graph (0, 0)][DBLP]
    Theor. Comput. Sci., 1992, v:93, n:2, pp:227-244 [Journal]
  31. Paola Bonizzoni, Gianluca Della Vedova
    The complexity of multiple sequence alignment with SP-score that is a metric. [Citation Graph (0, 0)][DBLP]
    Theor. Comput. Sci., 2001, v:259, n:1-2, pp:63-79 [Journal]
  32. Paola Bonizzoni, Gianluca Della Vedova, Riccardo Dondi
    Reconciling a gene tree to a species tree under the duplication cost model. [Citation Graph (0, 0)][DBLP]
    Theor. Comput. Sci., 2005, v:347, n:1-2, pp:36-53 [Journal]
  33. Paola Bonizzoni
    A Linear-Time Algorithm for the Perfect Phylogeny Haplotype Problem. [Citation Graph (0, 0)][DBLP]
    Algorithmica, 2007, v:48, n:3, pp:267-285 [Journal]
  34. Paola Bonizzoni, Gianluca Della Vedova, Riccardo Dondi
    Anonymizing Binary Tables is APX-hard [Citation Graph (0, 0)][DBLP]
    CoRR, 2007, v:0, n:, pp:- [Journal]

  35. The k-Anonymity Problem Is Hard. [Citation Graph (, )][DBLP]


  36. Minimum Factorization Agreement of Spliced ESTs. [Citation Graph (, )][DBLP]


  37. Haplotype Inference on Pedigrees with Recombinations and Mutations. [Citation Graph (, )][DBLP]


  38. Pure Parsimony Xor Haplotyping. [Citation Graph (, )][DBLP]


  39. Picture Languages Generated by Assembling Tiles. [Citation Graph (, )][DBLP]


  40. ASPicDB: A database resource for alternative splicing analysis. [Citation Graph (, )][DBLP]


  41. Approximating Clustering of Fingerprint Vectors with Missing Values [Citation Graph (, )][DBLP]


  42. A PTAS for the Minimum Consensus Clustering Problem with a Fixed Number of Clusters [Citation Graph (, )][DBLP]


  43. Parameterized Complexity of the k-anonymity Problem [Citation Graph (, )][DBLP]


  44. Circular Languages Generated by Complete Splicing Systems and Pure Unitary Languages [Citation Graph (, )][DBLP]


  45. Variants of Constrained Longest Common Subsequence [Citation Graph (, )][DBLP]


  46. Pure Parsimony Xor Haplotyping [Citation Graph (, )][DBLP]


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