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Nagiza F. Samatova: [Publications] [Author Rank by year] [Co-authors] [Prefers] [Cites] [Cited by]

Publications of Author

  1. Srikanth B. Yoginath, Nagiza F. Samatova, David Bauer, Guruprasade Kora, George Fann, Al Geist
    RScaLAPACK: High-Performance Parallel Statistical Computing with R and ScaLAPACK. [Citation Graph (0, 0)][DBLP]
    ISCA PDCS, 2005, pp:61-67 [Conf]
  2. W. Henry Suters, Faisal N. Abu-Khzam, Yun Zhang, Christopher T. Symons, Nagiza F. Samatova, Michael A. Langston
    A New Approach and Faster Exact Methods for the Maximum Common Subgraph Problem. [Citation Graph (0, 0)][DBLP]
    COCOON, 2005, pp:717-727 [Conf]
  3. Gong-Xin Yu, George Ostrouchov, Al Geist, Nagiza F. Samatova
    An SVM-based Algorithm for Identification of Photosynthesis-specific Genome Features. [Citation Graph (0, 0)][DBLP]
    CSB, 2003, pp:235-243 [Conf]
  4. Gong-Xin Yu, Byung-Hoon Park, Praveen Chandramohan, Al Geist, Nagiza F. Samatova
    In-Silico Prediction of Surface Residue Clusters for Enzyme-Substrate Specificity. [Citation Graph (0, 0)][DBLP]
    CSB, 2004, pp:696-697 [Conf]
  5. Brandon Thurmon, James M. McCollum, Gregory D. Peterson, Chris D. Cox, Nagiza F. Samatova, Gary Sayler, Michael L. Simpson
    Accelerating Exact Stochastic Simulation Using Reconfigurable Computing. [Citation Graph (0, 0)][DBLP]
    ERSA, 2005, pp:105-111 [Conf]
  6. Thomas E. Potok, Mark T. Elmore, Joel W. Reed, Nagiza F. Samatova
    An Ontology-Based HTML to XML Conversion Using Intelligent Agents. [Citation Graph (0, 0)][DBLP]
    HICSS, 2002, pp:120- [Conf]
  7. Byung-Hoon Park, George Ostrouchov, Gong-Xin Yu, Al Geist, Andrey Gorin, Nagiza F. Samatova
    Inference of Protein-Protein Interactions by Unlikely Profile Pair. [Citation Graph (0, 0)][DBLP]
    ICDM, 2003, pp:735-738 [Conf]
  8. Christopher T. Symons, Nagiza F. Samatova, Ramya Krishnamurthy, Byung H. Park, Tarik Umar, David Buttler, Terence Critchlow, David Hysom
    Multi-Criterion Active Learning in Conditional Random Fields. [Citation Graph (0, 0)][DBLP]
    ICTAI, 2006, pp:323-331 [Conf]
  9. Thomas E. Potok, Nenad Ivezic, Nagiza F. Samatova
    Agent-based Architecture for Flexible Lean Cell Design, Analysis and Evaluation. [Citation Graph (0, 0)][DBLP]
    DIISM, 2000, pp:181-188 [Conf]
  10. Heshan Lin, Xiaosong Ma, Praveen Chandramohan, Al Geist, Nagiza F. Samatova
    Efficient Data Access for Parallel BLAST. [Citation Graph (0, 0)][DBLP]
    IPDPS, 2005, pp:- [Conf]
  11. Nagiza F. Samatova, Al Geist, George Ostrouchov, Anatoli V. Melechko
    Parallel Out-of-Core Algorithm for Genome-Scale Enumeration of Metabolic Systemic Pathways. [Citation Graph (0, 0)][DBLP]
    IPDPS, 2002, pp:- [Conf]
  12. Faisal N. Abu-Khzam, Nagiza F. Samatova, George Ostrouchov, Michael A. Langston, Al Geist
    Distributed Dimension Reduction Algorithms for Widely Dispersed Data. [Citation Graph (0, 0)][DBLP]
    IASTED PDCS, 2002, pp:167-174 [Conf]
  13. Yun Zhang, Faisal N. Abu-Khzam, Nicole E. Baldwin, Elissa J. Chesler, Michael A. Langston, Nagiza F. Samatova
    Genome-Scale Computational Approaches to Memory-Intensive Applications in Systems Biology. [Citation Graph (0, 0)][DBLP]
    SC, 2005, pp:12- [Conf]
  14. Byung-Hoon Park, George Ostrouchov, Nagiza F. Samatova, Al Geist
    Reservoir-Based Random Sampling with Replacement from Data Stream. [Citation Graph (0, 0)][DBLP]
    SDM, 2004, pp:- [Conf]
  15. E. Wes Bethel, Greg Abram, John Shalf, Randy Frank, James P. Ahrens, Steve Parker, Nagiza F. Samatova, Mark Miller
    Interoperability of Visualization Software and Data Models is NOT an Achievable Goal. [Citation Graph (0, 0)][DBLP]
    IEEE Visualization, 2003, pp:607-610 [Conf]
  16. James M. McCollum, Gregory D. Peterson, Chris D. Cox, Michael L. Simpson, Nagiza F. Samatova
    The sorting direct method for stochastic simulation of biochemical systems with varying reaction execution behavior. [Citation Graph (0, 0)][DBLP]
    Computational Biology and Chemistry, 2006, v:30, n:1, pp:39-49 [Journal]
  17. Nagiza F. Samatova, George Ostrouchov, Al Geist, Anatoli V. Melechko
    RACHET: An Efficient Cover-Based Merging of Clustering Hierarchies from Distributed Datasets. [Citation Graph (0, 0)][DBLP]
    Distributed and Parallel Databases, 2002, v:11, n:2, pp:157-180 [Journal]
  18. George Ostrouchov, Nagiza F. Samatova
    On FastMap and the Convex Hull of Multivariate Data: Toward Fast and Robust Dimension Reduction. [Citation Graph (0, 0)][DBLP]
    IEEE Trans. Pattern Anal. Mach. Intell., 2005, v:27, n:8, pp:1340-1343 [Journal]
  19. Faisal N. Abu-Khzam, Nagiza F. Samatova, Mohamad A. Rizk, Michael A. Langston
    The Maximum Common Subgraph Problem: Faster Solutions via Vertex Cover. [Citation Graph (0, 0)][DBLP]
    AICCSA, 2007, pp:367-373 [Conf]
  20. Xiaosong Ma, Jiangtian Li, Nagiza F. Samatova
    Automatic Parallelization of Scripting Languages: Toward Transparent Desktop Parallel Computing. [Citation Graph (0, 0)][DBLP]
    IPDPS, 2007, pp:1-6 [Conf]
  21. Robert Sisneros, Chad Jones, Jian Huang, Jinzhu Gao, Byung-Hoon Park, Nagiza F. Samatova
    A Multi-Level Cache Model for Run-Time Optimization of Remote Visualization. [Citation Graph (0, 0)][DBLP]
    IEEE Trans. Vis. Comput. Graph., 2007, v:13, n:5, pp:991-1003 [Journal]

  22. Rapid and robust ranking of text documents in a dynamically changing corpus. [Citation Graph (, )][DBLP]


  23. A Fast, Accurate Algorithm for Identifying Functional Modules Through Pairwise Local Alignment of Protein Interaction Networks. [Citation Graph (, )][DBLP]


  24. Systematic Evaluation of Convergence Criteria in Iterative Training for NLP. [Citation Graph (, )][DBLP]


  25. PR: Automatic parallelization of data-parallel statistical computing codes for R in hybrid multi-node and multi-core environments. [Citation Graph (, )][DBLP]


  26. pR: Lightweight, Easy-to-Use Middleware to Plugin Parallel Analytical Computing with R. [Citation Graph (, )][DBLP]


  27. Web-Enabled R for Large-Scale Collaborative Data Mining: A Survey. [Citation Graph (, )][DBLP]


  28. Incremental All Pairs Similarity Search for Varying Similarity Thresholds with Reduced I/O Overhead. [Citation Graph (, )][DBLP]


  29. Parallel, scalable, memory-efficient backtracking for combinatoria modeling of large-scale biological systems. [Citation Graph (, )][DBLP]


  30. On perturbation theory and an algorithm for maximal clique enumeration in uncertain and noisy graphs. [Citation Graph (, )][DBLP]


  31. The Buffered Work-Pool Approach for Search-Tree Based Optimization Algorithms. [Citation Graph (, )][DBLP]


  32. Adaptive Request Scheduling for Parallel Scientific Web Services. [Citation Graph (, )][DBLP]


  33. Fast Matching for All Pairs Similarity Search. [Citation Graph (, )][DBLP]


  34. Multi-stage Framework to Infer Protein Functional Modules from Mass Spectrometry Pull-Down Data with Assessment of Biological Relevance. [Citation Graph (, )][DBLP]


  35. An Algorithm for the Discovery of Phenotype Related Metabolic Pathways. [Citation Graph (, )][DBLP]


  36. From pull-down data to protein interaction networks and complexes with biological relevance. [Citation Graph (, )][DBLP]


  37. A high-throughput de novo sequencing approach for shotgun proteomics using high-resolution tandem mass spectrometry. [Citation Graph (, )][DBLP]


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