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Olivier Bodenreider: [Publications] [Author Rank by year] [Co-authors] [Prefers] [Cites] [Cited by]

Publications of Author

  1. Olivier Bodenreider, Thomas C. Rindflesch, Anita Burgun
    Unsupervised, corpus-based method for extending a biomedical terminology. [Citation Graph (0, 0)][DBLP]
    ACL Workshop on Natural Language Processing in the Biomedical Domain, 2002, pp:53-60 [Conf]
  2. Francisco Azuaje, Olivier Bodenreider
    Incorporating Ontology-Driven Similarity Knowledge into Functional Genomics: An Exploratory Study. [Citation Graph (0, 0)][DBLP]
    BIBE, 2004, pp:317-324 [Conf]
  3. Haiying Wang, Francisco Azuaje, Olivier Bodenreider
    An Ontology-Driven Clustering Method for Supporting Gene Expression Analysis. [Citation Graph (0, 0)][DBLP]
    CBMS, 2005, pp:389-394 [Conf]
  4. Anita Burgun, Olivier Bodenreider
    Aspects of the taxonomic relation in the biomedical domain. [Citation Graph (0, 0)][DBLP]
    FOIS, 2001, pp:222-233 [Conf]
  5. Francisco Azuaje, Haiying Wang, Huiru Zheng, Olivier Bodenreider, Alban Chesneau
    Predictive Integration of Gene Ontology-Driven Similarity and Functional Interactions. [Citation Graph (0, 0)][DBLP]
    ICDM Workshops, 2006, pp:114-119 [Conf]
  6. Olivier Bodenreider, Barry Smith, Anand Kumar, Anita Burgun
    Investigating subsumption in DL-based terminologies: A Case Study in SNOMED CT . [Citation Graph (0, 0)][DBLP]
    KR-MED, 2004, pp:12-20 [Conf]
  7. Songmao Zhang, Peter Mork, Olivier Bodenreider
    Lessons learned from aligning two representations of anatomy. [Citation Graph (0, 0)][DBLP]
    KR-MED, 2004, pp:102-108 [Conf]
  8. K. Bretonnel Cohen, Olivier Bodenreider, Lynette Hirschman
    Session Introduction. [Citation Graph (0, 0)][DBLP]
    Pacific Symposium on Biocomputing, 2006, pp:1-3 [Conf]
  9. Olivier Bodenreider, Marc Aubry, Anita Burgun
    Non-Lexical Approaches to Identifying Associative Relations in the Gene Ontology. [Citation Graph (0, 0)][DBLP]
    Pacific Symposium on Biocomputing, 2005, pp:104-115 [Conf]
  10. Olivier Bodenreider, Joyce A. Mitchell, Alexa T. McCray
    Biomedical Ontologies - Session Introduction. [Citation Graph (0, 0)][DBLP]
    Pacific Symposium on Biocomputing, 2003, pp:562-564 [Conf]
  11. Olivier Bodenreider, Joyce A. Mitchell, Alexa T. McCray
    Session Introduction. [Citation Graph (0, 0)][DBLP]
    Pacific Symposium on Biocomputing, 2004, pp:164-165 [Conf]
  12. Olivier Bodenreider, Joyce A. Mitchell, Alexa T. McCray
    Session Introduction: Biomedical Ontologies. [Citation Graph (0, 0)][DBLP]
    Pacific Symposium on Biocomputing, 2005, pp:89-92 [Conf]
  13. M. N. Cantor, Indra Neil Sarkar, Olivier Bodenreider, Yves A. Lussier
    GenesTrace: Phenomic Knowledge Discovery via Structured Terminology. [Citation Graph (0, 0)][DBLP]
    Pacific Symposium on Biocomputing, 2005, pp:116-127 [Conf]
  14. Robert Stevens, Olivier Bodenreider, Yves A. Lussier
    Session Introduction. [Citation Graph (0, 0)][DBLP]
    Pacific Symposium on Biocomputing, 2006, pp:112-115 [Conf]
  15. Songmao Zhang, Olivier Bodenreider
    Investigating Implicit Knowledge in Ontologies with Application to the Anatomical Domain. [Citation Graph (0, 0)][DBLP]
    Pacific Symposium on Biocomputing, 2004, pp:250-261 [Conf]
  16. Songmao Zhang, Olivier Bodenreider, Christine Golbreich
    Experience in Reasoning with the Foundational Model of Anatomy in OWL DL. [Citation Graph (0, 0)][DBLP]
    Pacific Symposium on Biocomputing, 2006, pp:200-211 [Conf]
  17. Mehmet Kayaalp, Alan R. Aronson, Susanne M. Humphrey, Nicholas C. Ide, Lorraine K. Tanabe, Lawrence H. Smith, Dina Demner-Fushman, Russell R. Loane, James G. Mork, Olivier Bodenreider
    Methods for Accurate Retrieval of MEDLINE Citations in Functional Genomics. [Citation Graph (0, 0)][DBLP]
    TREC, 2003, pp:441-450 [Conf]
  18. Olivier Bodenreider, Robert Stevens
    Bio-ontologies: current trends and future directions. [Citation Graph (0, 0)][DBLP]
    Briefings in Bioinformatics, 2006, v:7, n:3, pp:256-274 [Journal]
  19. Olivier Bodenreider, Alexa T. McCray
    Exploring semantic groups through visual approaches. [Citation Graph (0, 0)][DBLP]
    Journal of Biomedical Informatics, 2003, v:36, n:6, pp:414-432 [Journal]
  20. Olivier Bodenreider
    The Unified Medical Language System (UMLS): integrating biomedical terminology. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2004, v:32, n:Database-Issue, pp:267-270 [Journal]
  21. Christine Golbreich, Songmao Zhang, Olivier Bodenreider
    The foundational model of anatomy in OWL: Experience and perspectives. [Citation Graph (0, 0)][DBLP]
    J. Web Sem., 2006, v:4, n:3, pp:181-195 [Journal]
  22. Songmao Zhang, Olivier Bodenreider
    Experience in Aligning Anatomical Ontologies. [Citation Graph (0, 0)][DBLP]
    Int. J. Semantic Web Inf. Syst., 2007, v:3, n:2, pp:1-26 [Journal]

  23. Finding Semantic Inconsistencies in UMLS using Answer Set Programming. [Citation Graph (, )][DBLP]


  24. Automatic Methods for Integrating Biomedical Data Sources in a Mediator-Based System. [Citation Graph (, )][DBLP]


  25. Ontologies and Data Integration in Biomedicine: Success Stories and Challenging Issues. [Citation Graph (, )][DBLP]


  26. SNOMED CT: Browsing the Browsers. [Citation Graph (, )][DBLP]


  27. Comparing SNOMED CT and the NCI Thesaurus through Semantic Web Technologies. [Citation Graph (, )][DBLP]


  28. NLM Anatomical Ontology Alignment System. Results of the 2006 Ontology Alignment Contest. [Citation Graph (, )][DBLP]


  29. Aligning Multiple Anatomical Ontologies through a Reference. [Citation Graph (, )][DBLP]


  30. Hybrid Alignment Strategy for Anatomical Ontologies: Results of the 2007 Ontology Alignment Contest. [Citation Graph (, )][DBLP]


  31. Provenance Information in Biomedical Knowledge Repositories - A Use Case. [Citation Graph (, )][DBLP]


  32. Provenance Context Entity (PaCE): Scalable Provenance Tracking for Scientific RDF Data. [Citation Graph (, )][DBLP]


  33. Méthodes de mapping situées aux niveaux instance et schéma pour l'intégration de sources de données hétérogènes. [Citation Graph (, )][DBLP]


  34. From "Glycosyltransferase" to "Congenital Muscular Dystrophy": Integrating Knowledge from NCBI Entrez Gene and the Gene Ontology. [Citation Graph (, )][DBLP]


  35. Lessons Learned from Cross-Validating Alignments between Large Anatomical Ontologies. [Citation Graph (, )][DBLP]


  36. Combining Lexical and Semantic Methods of Inter-terminology Mapping Using the UMLS. [Citation Graph (, )][DBLP]


  37. Comparing two approaches for aligning representations of anatomy. [Citation Graph (, )][DBLP]


  38. Investigating subsumption in SNOMED CT: An exploration into large description logic-based biomedical terminologies. [Citation Graph (, )][DBLP]


  39. Alignment of the UMLS semantic network with BioTop: methodology and assessment. [Citation Graph (, )][DBLP]


  40. Advancing translational research with the Semantic Web. [Citation Graph (, )][DBLP]


  41. Mapping data elements to terminological resources for integrating biomedical data sources. [Citation Graph (, )][DBLP]


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