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Publications of Author

1. Sherri Matis, Howard Doyle, Ignazio Marino, Richard J. Mural, Edward C. Uberbacher
   Use of Neural Networks for Prediction of Graft Failure following Liver Transplantation. [Citation Graph (0, 0)][DBLP]
   CBMS, 1995, pp:133-0 [Conf]
   
2. Marvin Frazier, David Thomassen, Aristides Patrinos, Gary Johnson, Carl Edward Oliver, Edward C. Uberbacher
   Stepping Up the Pace of Discovery: the Genomes to Life Program. [Citation Graph (0, 0)][DBLP]
   CSB, 2003, pp:2-9 [Conf]
   
3. Jane Razumovskaya, Victor Olman, Dong Xu, Edward C. Uberbacher, Nathan Verberkmoes, Ying Xu
   A Computational Method for Assessing Peptide-Identification Reliability in Tandem Mass Spectrometry Analysis with SEQUEST. [Citation Graph (0, 0)][DBLP]
   CSB, 2003, pp:421-423 [Conf]
   
4. Edward C. Uberbacher, David Thomassen, Aristides Patrinos, Gary Johnson, Carl Edward Oliver, Marvin Frazier
   Computing for the DOE Genomes to Life Program. [Citation Graph (0, 0)][DBLP]
   CSB, 2003, pp:32- [Conf]
   
5. Xiaojun Guan, Richard J. Mural, Edward C. Uberbacher
   Sequence comparison on a cluster of workstations using the PVM system. [Citation Graph (0, 0)][DBLP]
   IPPS, 1995, pp:190-195 [Conf]
   
6. Mark Craven, Richard J. Mural, Loren J. Hauser, Edward C. Uberbacher
   Predicting Protein Folding Classes without Overly Relying on Homology. [Citation Graph (0, 0)][DBLP]
   ISMB, 1995, pp:98-106 [Conf]
   
7. Ying Xu, Edward C. Uberbacher
   Gene Prediction by Pattern Recognition and Homology Search. [Citation Graph (0, 0)][DBLP]
   ISMB, 1996, pp:241-251 [Conf]
   
8. Yin Xu, J. Ralph Einstein, Richard J. Mural, Manesh J. Shah, Edward C. Uberbacher
   An Improved System for Exon Recognition and Gene Modeling in Human DNA Sequence. [Citation Graph (0, 0)][DBLP]
   ISMB, 1994, pp:376-0 [Conf]
   
9. Ying Xu, Richard J. Mural, Edward C. Uberbacher
   Inferring Gene Structures in Genomic Sequences Using Pattern Recognition and Expressed Sequence Tags. [Citation Graph (0, 0)][DBLP]
   ISMB, 1997, pp:344-353 [Conf]
   
10. Xiaojun Guan, Richard J. Mural, Reinhold Mann, Edward C. Uberbacher
    On Parallel Search of DNA Sequence Databases. [Citation Graph (0, 0)][DBLP]
    PPSC, 1991, pp:332-337 [Conf]
    
11. Ying Xu, Edward C. Uberbacher
    Reference-based gene model prediction on DNA contigs (extended abstract). [Citation Graph (0, 0)][DBLP]
    RECOMB, 1997, pp:330-336 [Conf]
    
12. Ying Xu, Dong Xu, Edward C. Uberbacher
    A new method for modeling and solving the protein fold recognition problem (extended abstract). [Citation Graph (0, 0)][DBLP]
    RECOMB, 1998, pp:285-292 [Conf]
    
13. Xiaojun Guan, Edward C. Uberbacher
    Alignments of DNA and protein sequences containing frameshift errors. [Citation Graph (0, 0)][DBLP]
    Computer Applications in the Biosciences, 1996, v:12, n:1, pp:31-40 [Journal]
    
14. Chandrasegaran Narasimhan, Philip F. LoCascio, Edward C. Uberbacher
    Background rareness-based iterative multiple sequence alignment algorithm for regulatory element detection. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2003, v:19, n:15, pp:1952-1963 [Journal]
    
15. Ying Xu, Edward C. Uberbacher
    A polynomial-time algorithm for a class of protein threading problems. [Citation Graph (0, 0)][DBLP]
    Computer Applications in the Biosciences, 1996, v:12, n:6, pp:511-517 [Journal]
    
16. Ying Xu, Richard J. Mural, Edward C. Uberbacher
    Constructing gene models from accurately predicted exons: an application of dynamic programming. [Citation Graph (0, 0)][DBLP]
    Computer Applications in the Biosciences, 1994, v:10, n:6, pp:613-623 [Journal]
    
17. Ying Xu, Richard J. Mural, Edward C. Uberbacher
    Correcting sequencing errors in DNA coding regions using a dynamic programming approach. [Citation Graph (0, 0)][DBLP]
    Computer Applications in the Biosciences, 1995, v:11, n:2, pp:117-124 [Journal]
    
18. Dong Xu, Michael A. Unseren, Ying Xu, Edward C. Uberbacher
    Sequence-structure specificity of a knowledge based energy function at the secondary structure level. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2000, v:16, n:3, pp:269-285 [Journal]
    
19. Sherri Matis, Ying Xu, Manesh J. Shah, Xiaojun Guan, J. Ralph Einstein, Richard J. Mural, Edward C. Uberbacher
    Detection of RNA Polymerase II Promoters and Polyadenylation Sites in Human DNA Sequence. [Citation Graph (0, 0)][DBLP]
    Computers & Chemistry, 1996, v:20, n:1, pp:135-140 [Journal]
    
20. Ying Xu, Edward C. Uberbacher
    2D image segmentation using minimum spanning trees. [Citation Graph (0, 0)][DBLP]
    Image Vision Comput., 1997, v:15, n:1, pp:47-57 [Journal]
    
21. Ying Xu, Edward C. Uberbacher
    Automated Gene Identification in Large-Scale Genomic Sequences. [Citation Graph (0, 0)][DBLP]
    Journal of Computational Biology, 1997, v:4, n:3, pp:325-338 [Journal]
    
22. Ying Xu, Richard J. Mural, Edward C. Uberbacher
    An Iterative Algorithm for Correcting Sequencing Errors in DNA Coding Regions. [Citation Graph (0, 0)][DBLP]
    Journal of Computational Biology, 1996, v:3, n:3, pp:333-344 [Journal]
    
23. Ying Xu, Dong Xu, Edward C. Uberbacher
    An Efficient Computational Method for Globally Optimal Threading. [Citation Graph (0, 0)][DBLP]
    Journal of Computational Biology, 1998, v:5, n:3, pp:597-0 [Journal]
    
24. Ying Xu, Victor Olman, Edward C. Uberbacher
    A segmentation algorithm for noisy images: Design and evaluation. [Citation Graph (0, 0)][DBLP]
    Pattern Recognition Letters, 1998, v:19, n:13, pp:1213-1224 [Journal]