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Publications of Author

1. Dukka Bahadur, Etsuji Tomita, Jun'ichi Suzuki, Katsuhisa Horimoto, Tatsuya Akutsu
   Clique-based algorithms for protein threading with profiles and constraints. [Citation Graph (0, 0)][DBLP]
   APBC, 2005, pp:51-64 [Conf]
   
2. Tatsuya Akutsu, Morihiro Hayashida, Etsuji Tomita, Jun'ichi Suzuki, Katsuhisa Horimoto
   Protein Threading with Profiles and Constraints. [Citation Graph (0, 0)][DBLP]
   BIBE, 2004, pp:537-544 [Conf]
   
3. Katsuhisa Horimoto, Kunio Oshima, Akira Tsugita, Jinya Otsuka
   Protein Superfamily Database (Prosup). [Citation Graph (0, 0)][DBLP]
   CODATA, 1994, pp:255-262 [Conf]
   
4. Sachiyo Aburatani, Kousuke Goto, Shigeru Saito, Masaki Fumoto, Akira Imaizumi, Nobuyoshi Sugaya, Hiroo Murakami, Makihiko Sato, Hiroyuki Toh, Katsuhisa Horimoto
   ASIAN: a website for network inference. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 2004, v:20, n:16, pp:2853-2856 [Journal]
   
5. Katsuhisa Horimoto, Satoshi Fukuchi, Kentaro Mori
   Comprehensive comparison between locations of orthologous genes on archaeal and bacterial genomes. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 2001, v:17, n:9, pp:791-802 [Journal]
   
6. Katsuhisa Horimoto, M. Suyama, Hiroyuki Toh, Kentaro Mori, Jinya Otsuka
   A method for comparing circular genomes from gene locations: application to mitochondrial genomes. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 1998, v:14, n:9, pp:789-802 [Journal]
   
7. Katsuhisa Horimoto, Hiroyuki Toh
   Statistical estimation of cluster boundaries in gene expression profile data. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 2001, v:17, n:12, pp:1143-1151 [Journal]
   
8. Hiroyuki Toh, Katsuhisa Horimoto
   Inference of a genetic network by a combined approach of cluster analysis and graphical Gaussian modeling. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 2002, v:18, n:2, pp:287-297 [Journal]
   
9. Tetsuya Sato, Yoshihiro Yamanishi, Katsuhisa Horimoto, Minoru Kanehisa, Hiroyuki Toh
   Partial correlation coefficient between distance matrices as a new indicator of protein-protein interactions. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 2006, v:22, n:20, pp:2488-2492 [Journal]
   
10. Bahadur K. C. Dukka, Etsuji Tomita, Jun'ichi Suzuki, Katsuhisa Horimoto, Tatsuya Akutsu
    Protein Threading with Profiles and Distance Constraints Using Clique Based Algorithms. [Citation Graph (0, 0)][DBLP]
    J. Bioinformatics and Computational Biology, 2006, v:4, n:1, pp:19-42 [Journal]
    
11. Hirokazu Anai, Shigeo Orii, Katsuhisa Horimoto
    Symbolic-numeric Estimation of Parameters in Biochemical Models by Quantifier Elimination. [Citation Graph (0, 0)][DBLP]
    J. Bioinformatics and Computational Biology, 2006, v:4, n:5, pp:1097-1118 [Journal]
    
12. Sachiyo Aburatani, Kousuke Goto, Shigeru Saito, Hiroyuki Toh, Katsuhisa Horimoto
    ASIAN: a web server for inferring a regulatory network framework from gene expression profiles. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2005, v:33, n:Web-Server-Issue, pp:659-664 [Journal]
    
13. Sachiyo Aburatani, Satoru Kuhara, Hiroyuki Toh, Katsuhisa Horimoto
    Deduction of a gene regulatory relationship framework from gene expression data by the application of graphical Gaussian modeling. [Citation Graph (0, 0)][DBLP]
    Signal Processing, 2003, v:83, n:4, pp:777-788 [Journal]
    
14. Hiroshi Yoshida, Koji Nakagawa, Hirokazu Anai, Katsuhisa Horimoto
    An Algebraic-Numeric Algorithm for the Model Selection in Kinetic Networks. [Citation Graph (0, 0)][DBLP]
    CASC, 2007, pp:433-447 [Conf]
    
15. Tetsuya Sato, Yoshihiro Yamanishi, Katsuhisa Horimoto, Minoru Kanehisa, Hiroyuki Toh
    Inference of Protein-Protein Interactions by Using Co-evolutionary Information. [Citation Graph (0, 0)][DBLP]
    AB, 2007, pp:322-333 [Conf]
    
16. Hiroshi Yoshida, Koji Nakagawa, Hirokazu Anai, Katsuhisa Horimoto
    Exact Parameter Determination for Parkinson's Disease Diagnosis with PET Using an Algebraic Approach. [Citation Graph (0, 0)][DBLP]
    AB, 2007, pp:110-124 [Conf]
    
17. 
    Completing Networks Using Observed Data. [Citation Graph (, )][DBLP]
    
    
18. 
    Co-Expressed Gene Assessment Based on the Path Consistency Algorithm: Operon Detention in Escherichia coli. [Citation Graph (, )][DBLP]
    
    
19. 
    Detection of network structure changes by graphical chain modeling: a case study of hepatitis C virus-related hepatocellular carcinoma. [Citation Graph (, )][DBLP]