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Publications of Author

1. Steven David Prestwich, Desmond G. Higgins, Orla O'Sullivan
   A SAT-Based Approach to Multiple Sequence Alignment. [Citation Graph (0, 0)][DBLP]
   CP, 2003, pp:940-944 [Conf]
   
2. Orla O'Sullivan, Mark Zehnder, Desmond G. Higgins, Philipp Bucher, Aurelien Grosdidier, Cédric Notredame
   APDB: a novel measure for benchmarking sequence alignment methods without reference alignments. [Citation Graph (0, 0)][DBLP]
   ISMB (Supplement of Bioinformatics), 2003, pp:215-221 [Conf]
   
3. Aedín C. Culhane, Jean Thioulouse, Guy Perrière, Desmond G. Higgins
   MADE4: an R package for multivariate analysis of gene expression data. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 2005, v:21, n:11, pp:2789-2790 [Journal]
   
4. Aedín C. Culhane, Guy Perrière, Elizabeth C. Considine, Thomas G. Cotter, Desmond G. Higgins
   Between-group analysis of microarray data. [Citation Graph (0, 0)][DBLP]
   Bioinformatics, 2002, v:18, n:12, pp:1600-1608 [Journal]
   
5. J. Heringa, H. Sommerfeldt, Desmond G. Higgins, P. Argos
   OBSTRUCT: a program to obtain largest cliques from a protein sequence set according to structural resolution and sequence similarity. [Citation Graph (0, 0)][DBLP]
   Computer Applications in the Biosciences, 1992, v:8, n:6, pp:599-600 [Journal]
   
6. Desmond G. Higgins
   Sequence ordinations: a multivariate analysis approach to analysing large sequence data sets. [Citation Graph (0, 0)][DBLP]
   Computer Applications in the Biosciences, 1992, v:8, n:1, pp:15-22 [Journal]
   
7. Desmond G. Higgins, Alan J. Bleasby, Rainer Fuchs
   CLUSTAL V: improved software for multiple sequence alignment. [Citation Graph (0, 0)][DBLP]
   Computer Applications in the Biosciences, 1992, v:8, n:2, pp:189-191 [Journal]
   
8. Desmond G. Higgins, Manolo Gouy
   Interfacing similarity search software with the sequence retrieval system ACNUC. [Citation Graph (0, 0)][DBLP]
   Computer Applications in the Biosciences, 1987, v:3, n:3, pp:239-241 [Journal]
   
9. Desmond G. Higgins, P. M. Sharp
   Fast and sensitive multiple sequence alignments on a microcomputer. [Citation Graph (0, 0)][DBLP]
   Computer Applications in the Biosciences, 1989, v:5, n:2, pp:151-153 [Journal]
   
10. Desmond G. Higgins, Peter Stoehr
    EMBLSCAN: fast approximate DNA database searches on compact disc. [Citation Graph (0, 0)][DBLP]
    Computer Applications in the Biosciences, 1992, v:8, n:2, pp:137-139 [Journal]
    
11. Cédric Notredame, Liisa Holm, Desmond G. Higgins
    COFFEE: an objective function for multiple sequence alignments. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 1998, v:14, n:5, pp:407-422 [Journal]
    
12. Emmet A. O'Brien, Desmond G. Higgins
    Empirical estimation of the reliability of ribosomal RNA alignments. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 1998, v:14, n:10, pp:830-838 [Journal]
    
13. Emmet A. O'Brien, Cédric Notredame, Desmond G. Higgins
    Optimization of ribosomal RNA profile alignments. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 1998, v:14, n:4, pp:332-341 [Journal]
    
14. Denis C. Shields, Desmond G. Higgins, P. M. Sharp
    GCWIND: a microcomputer program for identifying open reading frames according to codon positional G+C content. [Citation Graph (0, 0)][DBLP]
    Computer Applications in the Biosciences, 1992, v:8, n:5, pp:521-523 [Journal]
    
15. P. Thebault, P. Monestie, A. McGrath, Desmond G. Higgins
    MIAH: automatic alignment of eukaryotic SSU rRNAs. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 1999, v:15, n:4, pp:341-342 [Journal]
    
16. Julie Dawn Thompson, Desmond G. Higgins, Toby J. Gibson
    Improved sensitivity of profile searches through the use of sequence weights and gap excision. [Citation Graph (0, 0)][DBLP]
    Computer Applications in the Biosciences, 1994, v:10, n:1, pp:19-29 [Journal]
    
17. Iain M. Wallace, Orla O'Sullivan, Desmond G. Higgins
    Evaluation of iterative alignment algorithms for multiple alignment. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2005, v:21, n:8, pp:1408-1414 [Journal]
    
18. Fabrice Armougom, Olivier Poirot, Sébastien Moretti, Desmond G. Higgins, Phillip Bucher, Vladimir Keduas, Cédric Notredame
    APDB: a web server to evaluate the accuracy of sequence alignments using structural information. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2006, v:22, n:19, pp:2439-2440 [Journal]
    
19. Ian B. Jeffery, Stephen F. Madden, Paul A. McGettigan, Guy Perrière, Aedín C. Culhane, Desmond G. Higgins
    Integrating transcription factor binding site information with gene expression datasets. [Citation Graph (0, 0)][DBLP]
    Bioinformatics, 2007, v:23, n:3, pp:298-305 [Journal]
    
20. Aedín C. Culhane, Guy Perrière, Desmond G. Higgins
    Cross-platform comparison and visualisation of gene expression data using co-inertia analysis. [Citation Graph (0, 0)][DBLP]
    BMC Bioinformatics, 2003, v:4, n:, pp:59- [Journal]
    
21. Chenna Ramu, Hideaki Sugawara, Tadashi Koike, Rodrigo Lopez, Toby J. Gibson, Desmond G. Higgins, Julie Dawn Thompson
    Multiple sequence alignment with the Clustal series of programs. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 2003, v:31, n:13, pp:3497-3500 [Journal]
    
22. Catherine M. Rice, Rainer Fuchs, Desmond G. Higgins, Peter Stoehr, Graham Cameron
    The EMBL data library. [Citation Graph (0, 0)][DBLP]
    Nucleic Acids Research, 1993, v:21, n:13, pp:2967-2971 [Journal]
    
23. 
    Clustal W and Clustal X version 2.0. [Citation Graph (, )][DBLP]
    
    
24. 
    Supervised multivariate analysis of sequence groups to identify specificity determining residues. [Citation Graph (, )][DBLP]
    
    
25. 
    Comparison and evaluation of methods for generating differentially expressed gene lists from microarray data. [Citation Graph (, )][DBLP]
    
    
26. 
    Detecting microRNA activity from gene expression data. [Citation Graph (, )][DBLP]
    
    
27. 
    Fast embedding methods for clustering tens of thousands of sequences. [Citation Graph (, )][DBLP]